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Intron Name: Anas_platyrhynchos_platyrhynchos_1_65412258_65413625_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
65412258 - 65413625

Intron Length:
1368

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGT|GTGAGTATT

5'SS Class:
major

3'SS Sequence:
CCCTTTTCCACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATTAT

U12 Branch Point Sequence:
GTGTTATTATCC

Flanking Amino Acid:
WSAWATEHGEFEKHRQYHDH

Intron Amino Acid Position:
246

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.1
79.9
34.9

Major BPS
84.7
0.86
1
74.3
40.7

Major PPT
79.8
0.67
0.7
74.9
27.3

Minor 5ss
38.2
-1.3
3
52.2
44.4

Minor BPS
50.7
0
1.9
63.85
41.6

Associated Gene:

Gene:
EPS8

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

65377447 - 65508536
131090

65377447 - 65508536
131090