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Intron Name: Anas_platyrhynchos_platyrhynchos_1_65546102_65547825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65546102 - 65547825

Intron Length:

1724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTGTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TTTCCTGTTAAG

Flanking Amino Acid:

QILSADDKTVRLWDRSTMTE

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.3

32.8

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

67.9

0.4

1.1

71.9

38.3

Minor 5ss

33.3

-1.9

2.9

41.3

44.8

Minor BPS

43.9

-0.6

2.4

57.89

43.5

Associated Gene:

Gene:

STRAP

Ensembl Gene ID:

ENSAPLG00000011004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011400

65542021 - 65604921

62901

ENSAPLT00000035246

65542021 - 65607466

65446

ENSAPLT00000030344

65542021 - 65576862

34842

ENSAPLT00000029991

65542021 - 65579146

37126

ENSAPLT00000011484

65542021 - 65551072

9052