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Intron Name: Anas_platyrhynchos_platyrhynchos_1_65567297_65568782_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65567297 - 65568782

Intron Length:

1486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GCCTCCTTGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATTTATGAAACA

Flanking Amino Acid:

AAGCNIPVASVAAGFPSGQT

Intron Amino Acid Position:

611

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

63.9

0.31

57.4

38.6

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

46.1

-0.3

2.3

66.2

40.5

Associated Gene:

Gene:

STRAP

Ensembl Gene ID:

ENSAPLG00000011004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035246

65542021 - 65607466

65446

ENSAPLT00000030344

65542021 - 65576862

34842

ENSAPLT00000029991

65542021 - 65579146

37126

ENSAPLT00000011400

65542021 - 65604921

62901