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Intron Name: Anas_platyrhynchos_platyrhynchos_1_65686896_65688731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65686896 - 65688731

Intron Length:

1836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCAAATAATT

Flanking Amino Acid:

VCICMFLHFLGTALLPVVAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.2

0.66

0.8

35.1

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

49.3

0.03

77.27

38.4

Associated Gene:

Gene:

SLC15A5

Ensembl Gene ID:

ENSAPLG00000010794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027759

65659083 - 65690627

31545

ENSAPLT00000023595

65659083 - 65706137

47055

ENSAPLT00000046500

65644317 - 65706137

61821

ENSAPLT00000011235

65659083 - 65690627

31545

ENSAPLT00000042199

65659083 - 65724115

65033

ENSAPLT00000034337

65662647 - 65690627

27981