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Intron Name: Anas_platyrhynchos_platyrhynchos_1_65689169_65690577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

65689169 - 65690577

Intron Length:

1409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTAATTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

AGAGCCTTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.9

33.7

Major BPS

74.2

0.6

0.9

75.7

Major PPT

77.1

0.61

0.9

70.8

38.7

Minor 5ss

27.4

-2.6

2.7

31.6

42.2

Minor BPS

70.6

0.64

1.4

71.78

39.8

Associated Gene:

Gene:

SLC15A5

Ensembl Gene ID:

ENSAPLG00000010794

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034337

65662647 - 65690627

27981

ENSAPLT00000011235

65659083 - 65690627

31545