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Intron Name: Anas_platyrhynchos_platyrhynchos_1_65723576_65725032_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
65723576 - 65725032

Intron Length:
1457

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGATAA

5'SS Class:
strong_major

3'SS Sequence:
ATATTTTTTAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTAAT

U12 Branch Point Sequence:
TATTTTTTAAAG

Flanking Amino Acid:
MWYSSSRSSVRSGEMA

Intron Amino Acid Position:
7

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.2
0.76
1
73.9
32.9

Major BPS
82.2
0.8
0.9
81.6
27

Major PPT
74.4
0.55
1.1
75.2
38.1

Minor 5ss
35.9
-1.6
3.3
46.4
48.9

Minor BPS
67.6
0.41
1.4
69.32
37.9

Associated Gene:

Gene:
MGST1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

65723498 - 65731232
7735