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Intron Name: Anas_platyrhynchos_platyrhynchos_1_65876944_65888464_F

Intron Information:

Intron Rank:

142073

Intron Class:

major

Intron Phase:

Intron Coordinates:

65876944 - 65888464

Intron Length:

11521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGTGCAT

5'SS Class:

major

3'SS Sequence:

TGCTTATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCTTATAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.1

58.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.7

0.76

0.8

81.1

35.6

Minor 5ss

25.6

-2.8

3.4

37.7

47.1

Minor BPS

70.4

0.72

1.6

88.88

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035771

65876509 - 65889841

13333