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Intron Name: Anas_platyrhynchos_platyrhynchos_1_66085366_66090132_F

Intron Information:

Intron Rank:

140383

Intron Class:

major

Intron Phase:

Intron Coordinates:

66085366 - 66090132

Intron Length:

4767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTCATAGAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

82.8

0.74

0.9

80.2

37.3

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

43.9

-0.3

2.1

68.51

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043419

66078636 - 66090200

11565