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Intron Name: Anas_platyrhynchos_platyrhynchos_1_66381738_66382885_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66381738 - 66382885

Intron Length:

1148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTCTCTAATT

Flanking Amino Acid:

IQESHIGACKKMVESAVVLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

87.9

0.85

0.8

85.7

33.4

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

0.86

1.6

92.5

29.7

Associated Gene:

Gene:

RERGL

Ensembl Gene ID:

ENSAPLG00000010631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037407

66379676 - 66388366

8691

ENSAPLT00000011059

66379676 - 66402968

23293