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Intron Name: Anas_platyrhynchos_platyrhynchos_1_66387848_66402772_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66387848 - 66402772

Intron Length:

14925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TGCCCCTCACTC

Flanking Amino Acid:

TKYPPLAVRFLTRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.3

81.8

38.5

Major BPS

0.22

1.2

52.4

43.3

Major PPT

84.2

0.77

0.7

80.1

25.2

Minor 5ss

38.8

-1.3

2.8

50.7

39.1

Minor BPS

47.6

-0.2

1.8

56.76

Associated Gene:

Gene:

RERGL

Ensembl Gene ID:

ENSAPLG00000010631

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011059

66379676 - 66402968

23293