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Intron Name: Anas_platyrhynchos_platyrhynchos_1_66567499_66574512_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
66567499 - 66574512

Intron Length:
7014

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTAAGTTCG

5'SS Class:
major

3'SS Sequence:
GTGTCCATTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTGAG

U12 Branch Point Sequence:
TCTGTGTCCATT

Flanking Amino Acid:
AWTCSPLYPKERLIHGTVLL

Intron Amino Acid Position:
617

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75
0.59
1.1
66.1
40.7

Major BPS
59.6
0.24
1.5
57.3
41.7

Major PPT
73.9
0.54
1
66.7
39.3

Minor 5ss
41.8
-0.9
2.7
47.3
42.1

Minor BPS
38.9
-0.7
2.4
58.48
45.6

Associated Gene:

Gene:
PIK3C2G

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

66499412 - 66708072
208661