Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_66628756_66630943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66628756 - 66630943

Intron Length:

2188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

GCTATTTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

GCTATTTTAACA

Flanking Amino Acid:

PSGNINIIFKIGDDLRQDML

Intron Amino Acid Position:

952

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

0.54

69.1

40.6

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

65.4

0.48

1.3

68.05

38.5

Associated Gene:

Gene:

PIK3C2G

Ensembl Gene ID:

ENSAPLG00000009943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010372

66499412 - 66708072

208661