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Intron Name: Anas_platyrhynchos_platyrhynchos_1_66715846_66718675_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66715846 - 66718675

Intron Length:

2830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ACAACTTTAATT

Flanking Amino Acid:

YSKPMSLSIRLISGHQLPPS

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

38.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

86.2

0.81

0.8

80.2

36.9

Minor 5ss

-0.3

2.8

56.2

Minor BPS

65.3

0.56

1.3

71.72

39.6

Associated Gene:

Gene:

PLCZ1

Ensembl Gene ID:

ENSAPLG00000009837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035623

66710948 - 66758473

47526

ENSAPLT00000010287

66710948 - 66758940

47993