Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_66758433_66758926_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

66758433 - 66758926

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

CAG|ATATCCTCC

5'SS Class:

strong_minor

3'SS Sequence:

TGATCTTTTGTAC|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

GTTTCCTTAATG

Flanking Amino Acid:

MEENRWFLNIIQDE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

37.1

-0.8

3.5

50.3

41.8

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

43.3

-0.3

3.2

65.9

40.6

Minor 5ss

82.1

1.07

1.4

86.8

28.2

Minor BPS

83.1

0.9

1.2

80.32

35.6

Associated Gene:

Gene:

PLCZ1

Ensembl Gene ID:

ENSAPLG00000009837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010287

66710948 - 66758940

47993