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Intron Name: Anas_platyrhynchos_platyrhynchos_1_66993904_66994800_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66993904 - 66994800

Intron Length:

897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CATTTCCAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATATTTTAATT

Flanking Amino Acid:

DHINRKYAFKAAHPNMRTYY

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.2

0.43

67.9

37.5

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

71.1

0.74

1.2

81.23

34.4

Associated Gene:

Gene:

PLEKHA5

Ensembl Gene ID:

ENSAPLG00000008987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018561

66878785 - 67041960

163176

ENSAPLT00000036611

66878785 - 67041960

163176

ENSAPLT00000009394

66878785 - 67041960

163176

ENSAPLT00000031479

66878785 - 67041960

163176

ENSAPLT00000030084

66878785 - 67041960

163176

ENSAPLT00000019950

66878785 - 67041960

163176

ENSAPLT00000039515

66878785 - 67041960

163176