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Intron Name: Anas_platyrhynchos_platyrhynchos_1_67011743_67018118_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

67011743 - 67018118

Intron Length:

6376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCTAT

5'SS Class:

major

3'SS Sequence:

TGATTTGAAATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TCCTCCTGATTT

Flanking Amino Acid:

QLKLEASSPKMKENEPLITM

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.3

74.9

38.1

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

59.1

0.21

1.1

55.5

43.7

Minor 5ss

40.9

-1

48.2

Minor BPS

56.6

0.29

1.8

72.32

Associated Gene:

Gene:

PLEKHA5

Ensembl Gene ID:

ENSAPLG00000008987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030084

66878785 - 67041960

163176