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Intron Name: Anas_platyrhynchos_platyrhynchos_1_67018200_67023841_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67018200 - 67023841

Intron Length:

5642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TCTTCCTTATAG

Flanking Amino Acid:

SALRPQLYQQLTQEECRGAL

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

75.9

34.3

Major BPS

75.9

0.64

66.1

40.5

Major PPT

85.2

0.79

0.6

80.6

24.8

Minor 5ss

41.1

-1

3.3

57.2

41.4

Minor BPS

0.27

1.8

68.56

44.7

Associated Gene:

Gene:

PLEKHA5

Ensembl Gene ID:

ENSAPLG00000008987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009394

66878785 - 67041960

163176

ENSAPLT00000031479

66878785 - 67041960

163176

ENSAPLT00000030084

66878785 - 67041960

163176

ENSAPLT00000019950

66878785 - 67041960

163176