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Intron Name: Anas_platyrhynchos_platyrhynchos_1_67029405_67029977_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67029405 - 67029977

Intron Length:

573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

TGTCATTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GTTTATTTACCT

Flanking Amino Acid:

QGYQRNGSHCGPDYRLYKSE

Intron Amino Acid Position:

907

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.1

64.4

41.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

80.7

0.69

0.9

77.5

36.5

Minor 5ss

-1.7

3.3

44.4

43.5

Minor BPS

62.2

0.46

1.8

81.57

39.9

Associated Gene:

Gene:

PLEKHA5

Ensembl Gene ID:

ENSAPLG00000008987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036611

66878785 - 67041960

163176

ENSAPLT00000031479

66878785 - 67041960

163176

ENSAPLT00000018561

66878785 - 67041960

163176

ENSAPLT00000039515

66878785 - 67041960

163176