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Intron Name: Anas_platyrhynchos_platyrhynchos_1_67082660_67085810_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
67082660 - 67085810

Intron Length:
3151

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTTGGTGTT

5'SS Class:
major

3'SS Sequence:
TTTACATTATTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTACAT

U12 Branch Point Sequence:
TTTACATTATTA

Flanking Amino Acid:
SIHVDGQRGGVFVCLWKGCK

Intron Amino Acid Position:
310

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.5
0.39
1.3
68.2
42.9

Major BPS
82.7
0.81
0.9
89.3
26.1

Major PPT
72.4
0.5
0.9
71.8
38.1

Minor 5ss
33.1
-1.9
3.5
41.8
44.9

Minor BPS
56.9
0.21
1.9
73.49
38.3

Associated Gene:

Gene:
AEBP2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67063601 - 67116736
53136

67063601 - 67116740
53140