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Intron Name: Anas_platyrhynchos_platyrhynchos_1_67105091_67111208_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
67105091 - 67111208

Intron Length:
6118

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGTATT

5'SS Class:
major

3'SS Sequence:
TACCTATTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTGATTTTAATT

Flanking Amino Acid:
KGHSVVFHSTVIAKRKEDSG

Intron Amino Acid Position:
450

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.7
0.68
1.1
84.2
33.6

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
80.3
0.68
0.8
77.3
35.6

Minor 5ss
44.6
-0.6
2.9
70.4
39.5

Minor BPS
69.4
0.69
1.2
79.64
37.1

Associated Gene:

Gene:
AEBP2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67063601 - 67116736
53136

67063601 - 67116740
53140