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Intron Name: Anas_platyrhynchos_platyrhynchos_1_67115101_67116709_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
67115101 - 67116709

Intron Length:
1609

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATGTCC

5'SS Class:
major

3'SS Sequence:
TCTTCTTTTCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTGAA

U12 Branch Point Sequence:
TTTTTGTGAAAG

Flanking Amino Acid:
TALLLDPNIYRTMPQKRLKR

Intron Amino Acid Position:
510

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.2
0.69
1
69.4
36

Major BPS
72.1
0.55
1.2
63.4
44.3

Major PPT
91.2
0.93
0.6
84.1
30.8

Minor 5ss
38.1
-1.3
3.2
51.4
45.3

Minor BPS
48.7
-0.2
2.3
65.14
42.5

Associated Gene:

Gene:
AEBP2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67063601 - 67116740
53140