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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6756551_6760687_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6756551 - 6760687

Intron Length:

4137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGCC

5'SS Class:

strong_major

3'SS Sequence:

ATTTAATTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TCCTATTTAATT

Flanking Amino Acid:

LHRELLMNQKRGLAPQNKPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

69.3

33.7

Major BPS

90.7

1.01

0.7

19.9

Major PPT

70.6

0.46

1.1

73.2

40.6

Minor 5ss

-2.2

3.4

42.5

44.5

Minor BPS

65.6

0.57

1.5

76.08

41.4

Associated Gene:

Gene:

FAM107B

Ensembl Gene ID:

ENSAPLG00000002518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020025

6754286 - 6805262

50977

ENSAPLT00000002530

6754286 - 6769357

15072