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Intron Name: Anas_platyrhynchos_platyrhynchos_1_67707292_67710816_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
67707292 - 67710816

Intron Length:
3525

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTT|GTAAGTAGT

5'SS Class:
major

3'SS Sequence:
CTTTGTATCACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTCAT

U12 Branch Point Sequence:
TGTTTAATAACA

Flanking Amino Acid:
ALECGYREIPYHNRIHATDV

Intron Amino Acid Position:
428

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1
76.5
38.6

Major BPS
87.1
0.92
0.7
85.9
22.5

Major PPT
78.6
0.64
0.9
72.7
36.3

Minor 5ss
40
-1.1
2.9
57.4
41.1

Minor BPS
57.7
0.24
1.9
74.35
36.5

Associated Gene:

Gene:
PDE3A

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67606195 - 67725902
119708

67473433 - 67727021
253589

67665686 - 67725902
60217

67623175 - 67725902
102728