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Intron Name: Anas_platyrhynchos_platyrhynchos_1_67779819_67780109_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

67779819 - 67780109

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGCC

5'SS Class:

major

3'SS Sequence:

TCCAACCTGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCATGAT

U12 Branch Point Sequence:

CATGATTGAACC

Flanking Amino Acid:

CQPRSPVRVKAAYFRTFWPL

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

71.5

33.9

Major BPS

72.1

0.55

1.1

44.2

Major PPT

50.9

0.02

1.1

48.6

39.2

Minor 5ss

29.1

-2.4

3.7

41.3

45.5

Minor BPS

-0.1

1.7

57.14

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042357

67779384 - 67789870

10487

ENSAPLT00000007923

67779384 - 67803315

23932