Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_68215181_68230307_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68215181 - 68230307

Intron Length:

15127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGAAT

U12 Branch Point Sequence:

TTTTTCTTCCCA

Flanking Amino Acid:

ALSIIVEEFKALLQSTVQQQ

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

71.2

40.6

Major BPS

56.8

0.17

1.6

69.7

44.2

Major PPT

90.9

0.92

0.6

84.7

30.2

Minor 5ss

38.1

-1.3

47.8

47.9

Minor BPS

46.5

-0.2

3.6

78.35

38.8

Associated Gene:

Gene:

CCDC91

Ensembl Gene ID:

ENSAPLG00000007376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007659

68214980 - 68281308

66329

ENSAPLT00000046050

68214980 - 68276513

61534