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Intron Name: Anas_platyrhynchos_platyrhynchos_1_68407697_68408831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

68407697 - 68408831

Intron Length:

1135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTGTG

5'SS Class:

major

3'SS Sequence:

CCTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

TCTTTCGGGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

67.4

Major BPS

55.9

0.15

1.2

Major PPT

0.81

0.7

80.5

24.8

Minor 5ss

35.4

-1.7

3.6

47.2

Minor BPS

49.4

0.04

2.2

75.01

42.2

Associated Gene:

Gene:

PTHLH

Ensembl Gene ID:

ENSAPLG00000013515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045919

68407631 - 68418948

11318