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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6883514_6885120_R

Intron Information:

Intron Rank:

141556

Intron Class:

major

Intron Phase:

Intron Coordinates:

6883514 - 6885120

Intron Length:

1607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTGATGTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

83.9

30.3

Major BPS

84.4

0.85

34.5

Major PPT

85.9

0.81

0.8

80.9

31.1

Minor 5ss

40.2

-1.1

49.9

46.4

Minor BPS

48.1

-0.1

2.1

57.77

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024331

6882009 - 6886180

4172

ENSAPLT00000040874

6883077 - 6886180

3104