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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6898897_6899345_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6898897 - 6899345

Intron Length:

449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTCTGTTAAAC

Flanking Amino Acid:

PMNEENKFAQIVLQDLDKKE

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.4

0.44

65.4

39.1

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

49.4

-0

2.1

64.41

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006517

6890060 - 6901132

11073