Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_69270914_69271610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69270914 - 69271610

Intron Length:

697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGGTATC

5'SS Class:

major

3'SS Sequence:

GCATCATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

GTCACTATAACA

Flanking Amino Acid:

GKTETNSSNP*

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

78.2

36.4

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

68.5

0.42

0.9

Minor 5ss

41.3

-1

3.1

58.4

39.6

Minor BPS

55.8

0.18

1.7

65.83

40.4

Associated Gene:

Gene:

CREBL2

Ensembl Gene ID:

ENSAPLG00000013223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013766

69270912 - 69281412

10501