Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_69354380_69359547_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69354380 - 69359547

Intron Length:

5168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTCTTTCATA

Flanking Amino Acid:

LGCQRDVLNKELMQQNDIGY

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.3

0.75

0.7

79.7

25.9

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

64.3

0.44

1.7

74.34

38.4

Associated Gene:

Gene:

DUSP16

Ensembl Gene ID:

ENSAPLG00000013015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013565

69313800 - 69365011

51212