Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_69445519_69446147_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69445519 - 69446147

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTGGC

5'SS Class:

major

3'SS Sequence:

CCAATCCTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

CATCCTCCAATC

Flanking Amino Acid:

EGRPGEPGASASPSPAKQRA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.3

66.2

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

67.8

0.4

0.9

58.3

38.1

Minor 5ss

27.1

-2.6

3.2

35.3

41.3

Minor BPS

45.3

-0.3

1.8

53.97

37.9

Associated Gene:

Gene:

BORCS5

Ensembl Gene ID:

ENSAPLG00000013011

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013540

69375013 - 69446205

71193