Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_69534209_69543001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69534209 - 69543001

Intron Length:

8793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGCTTT

5'SS Class:

major

3'SS Sequence:

CTTATGCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

TTTCCCTTATGC

Flanking Amino Acid:

LLENGKTCKDGATELLLLAR

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

71.5

41.1

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

68.5

0.42

62.8

38.6

Minor 5ss

48.5

-0.1

3.2

69.4

43.7

Minor BPS

61.6

0.34

1.9

75.85

40.5

Associated Gene:

Gene:

LRP6

Ensembl Gene ID:

ENSAPLG00000012219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012751

69479190 - 69590571

111382