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Intron Name: Anas_platyrhynchos_platyrhynchos_1_69573157_69573211_F


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
69573157 - 69573211

Intron Length:
55

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTCCTTTTT

5'SS Class:
major

3'SS Sequence:
TATTGACAGCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTGAC

U12 Branch Point Sequence:
ATAGCCTTAGCT

Flanking Amino Acid:
RAALDGTERELGKLFWADSD

Intron Amino Acid Position:
1104

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.3
0.34
1.4
71.8
40.6

Major BPS
78.7
0.71
0.9
69.3
37.7

Major PPT
60.2
0.23
1.1
52.4
46.1

Minor 5ss
40.5
-1.1
3.1
59.4
44.9

Minor BPS
65.1
0.55
1.7
79.51
42.3

Associated Gene:

Gene:
LRP6

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

69479190 - 69590571
111382