Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_6959893_6964334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6959893 - 6964334

Intron Length:

4442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGTAC

5'SS Class:

major

3'SS Sequence:

CTTCCTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

ACACACTTAACC

Flanking Amino Acid:

IANHKDVSFPASTDSPAATV

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

64.6

35.8

Major BPS

72.8

0.57

30.3

Major PPT

88.5

0.87

0.7

83.8

24.3

Minor 5ss

37.2

-1.4

3.3

46.7

43.5

Minor BPS

60.8

0.32

1.5

64.63

40.2

Associated Gene:

Gene:

DMTF1

Ensembl Gene ID:

ENSAPLG00000009042

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036689

6954678 - 6976486

21809