Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_697660_698517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

697660 - 698517

Intron Length:

858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAT

U12 Branch Point Sequence:

TTCTCCTCCACG

Flanking Amino Acid:

MALGIIILKKRYSMSKYTSI

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

74.7

35.6

Major BPS

55.3

0.13

1.3

64.4

41.8

Major PPT

70.6

0.46

0.8

65.4

29.3

Minor 5ss

33.9

-1.8

43.8

43.9

Minor BPS

56.3

0.05

2.1

67.41

46.1

Associated Gene:

Gene:

SLC35B4

Ensembl Gene ID:

ENSAPLG00000005885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006109

693025 - 703911

10887