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Intron Name: Anas_platyrhynchos_platyrhynchos_1_69887098_69887908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

69887098 - 69887908

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TGCTACCTATTT

Flanking Amino Acid:

CKSKAKQNLARCLLRERDVM

Intron Amino Acid Position:

476

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

76.3

0.65

67.3

39.3

Major PPT

88.7

0.87

0.6

21.8

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

46.4

-0.2

2.1

66.42

44.2

Associated Gene:

Gene:

TTC38

Ensembl Gene ID:

ENSAPLG00000010920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011412

69886004 - 69910334

24331