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Intron Name: Anas_platyrhynchos_platyrhynchos_1_69920181_69930650_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

69920181 - 69930650

Intron Length:

10470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAAGAT

U12 Branch Point Sequence:

AGCTCTAAGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

55.1

0.13

1.2

52.7

41.6

Major PPT

81.9

0.72

0.8

77.2

31.5

Minor 5ss

41.2

-1

2.9

54.6

44.5

Minor BPS

44.1

-0.3

1.8

58.22

39.3

Associated Gene:

Gene:

CDPF1

Ensembl Gene ID:

ENSAPLG00000017850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045578

69919974 - 69938831

18858