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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70406682_70454269_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
70406682 - 70454269

Intron Length:
47588

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCT|GTAAGTGAT

5'SS Class:
major

3'SS Sequence:
TGCTTTTCTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
TGGTTCTAATGT

Flanking Amino Acid:
IFLILTSGSYLALSSVVALG

Intron Amino Acid Position:
28

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76
0.61
1.1
74.7
35.4

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
86.3
0.82
0.7
84.6
30.3

Minor 5ss
37.3
-1.4
3.4
59
45.5

Minor BPS
45.2
-0.2
2.1
63.5
46.9

Associated Gene:

Gene:
WNT7B

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70405765 - 70494895
89131