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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70740591_70761392_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70740591 - 70761392

Intron Length:
20802

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGTAGA

5'SS Class:
strong_major

3'SS Sequence:
TCTATCCCAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAT

U12 Branch Point Sequence:
TTCTTATTAATG

Flanking Amino Acid:
IKRYMDGMTVGVVRQVRPIV

Intron Amino Acid Position:
828

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.4
0.76
0.9
74.1
38.4

Major BPS
91.8
1.04
0.7
90.2
19.3

Major PPT
72
0.5
0.9
66.6
34.2

Minor 5ss
29.2
-2.4
2.5
25
36.7

Minor BPS
63.1
0.27
1.7
67.73
40.4

Associated Gene:

Gene:
FBLN1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70739552 - 70827792
88241