About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_70763666_70776623_R

Intron Information:

Intron Rank:
16
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
70763666 - 70776623
Intron Length:
12958

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TAC|GTAAGTACT
5'SS Class:
strong_major
3'SS Sequence:
TTGTTTCTCTTAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTCAG
U12 Branch Point Sequence:
TTTTCAGGATAC
Flanking Amino Acid:
CPENYRKSGDTVRLEKTDTI
Intron Amino Acid Position:
736

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
81.3
0.74
1.2
84.4
33.5
Major BPS
76
0.65
1.5
85.7
34.9
Major PPT
81.7
0.71
0.7
81.5
30.6
Minor 5ss
39.8
-1.1
2.8
52.2
37.4
Minor BPS
41
-0.7
2.4
61.99
42.8

Associated Gene:

Gene:
FBLN1
Ensembl Gene ID:
ENSAPLG00000010087
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010574
70739552 - 70827792
88241