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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70779128_70779626_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70779128 - 70779626

Intron Length:
499

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGTTGT

5'SS Class:
strong_major

3'SS Sequence:
TTTATCATTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTATCAT

U12 Branch Point Sequence:
GTATGTTTATCA

Flanking Amino Acid:
SFDVISRTCVDINECRRYPG

Intron Amino Acid Position:
569

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.6
0.91
0.8
80.5
34.9

Major BPS
88.2
0.95
0.9
88.3
28.5

Major PPT
84.1
0.77
0.8
78.3
34.6

Minor 5ss
42.1
-0.9
2.9
55.5
43.9

Minor BPS
50.2
0
2
64.67
41.8

Associated Gene:

Gene:
FBLN1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70768728 - 70803660
34933

70739552 - 70827792
88241