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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70780816_70783068_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70780816 - 70783068

Intron Length:
2253

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGACAT

5'SS Class:
strong_major

3'SS Sequence:
TGTACTCTTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTTAC

U12 Branch Point Sequence:
GTTACATTGACT

Flanking Amino Acid:
FIQDALGNCIDINECLSTNM

Intron Amino Acid Position:
478

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.3
0.78
0.9
73.4
37.3

Major BPS
71.4
0.53
1.2
63.4
44

Major PPT
80.1
0.68
0.9
73.5
36.8

Minor 5ss
33.8
-1.8
3.2
45.3
43.7

Minor BPS
65.5
0.57
1.7
82.63
37.9

Associated Gene:

Gene:
FBLN1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70768728 - 70803660
34933

70739552 - 70827792
88241