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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70785699_70786975_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70785699 - 70786975

Intron Length:
1277

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAAAGAA

5'SS Class:
strong_major

3'SS Sequence:
TTACATATTCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTACAT

U12 Branch Point Sequence:
CCTCCCTTTACA

Flanking Amino Acid:
QLQPDGVNCEDINECITGTH

Intron Amino Acid Position:
386

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.9
0.75
0.9
73.7
30.1

Major BPS
82.7
0.81
0.9
89.3
26.1

Major PPT
75.9
0.58
1
66.7
43.4

Minor 5ss
29.1
-2.4
3.4
37.8
47

Minor BPS
62.9
0.4
1.7
68.86
43.2

Associated Gene:

Gene:
FBLN1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70739552 - 70827792
88241

70768728 - 70803660
34933