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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70787811_70789352_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70787811 - 70789352

Intron Length:
1542

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGTCAG

5'SS Class:
strong_major

3'SS Sequence:
TTCTCTATTGTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATCTAAC

U12 Branch Point Sequence:
AAGTATCTAACC

Flanking Amino Acid:
EDPYLHDGCRGILKASIINL

Intron Amino Acid Position:
136

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.6
1.03
0.8
77.9
38.6

Major BPS
75.8
0.64
0.9
75.6
25.3

Major PPT
81.9
0.72
0.7
77.9
29.3

Minor 5ss
33.6
-1.9
2.9
40.4
45.7

Minor BPS
49
-0
1.8
59.86
38.8

Associated Gene:

Gene:
FBLN1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70768728 - 70803660
34933