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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70888455_70889648_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70888455 - 70889648

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

AATTTTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAATT

Flanking Amino Acid:

VKARNCLIFQGTVELIAMKK

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

75.6

0.58

0.9

70.3

40.3

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

71.4

0.75

1.4

87.38

32.1

Associated Gene:

Gene:

SMC1B

Ensembl Gene ID:

ENSAPLG00000008824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022161

70885873 - 70920473

34601

ENSAPLT00000009237

70885873 - 70920473

34601

ENSAPLT00000044324

70885873 - 70920473

34601