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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70889853_70890192_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70889853 - 70890192

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTAATGTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTGAACT

Flanking Amino Acid:

RKQAKMEKEEADHYQMLIKE

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

74.1

38.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

65.4

0.35

1.1

62.1

Minor 5ss

39.1

-1.2

2.9

49.8

46.4

Minor BPS

70.4

0.72

1.4

84.09

36.9

Associated Gene:

Gene:

SMC1B

Ensembl Gene ID:

ENSAPLG00000008824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022161

70885873 - 70920473

34601

ENSAPLT00000009237

70885873 - 70920473

34601

ENSAPLT00000044324

70885873 - 70920473

34601