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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70902171_70902776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70902171 - 70902776

Intron Length:

606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTTC

5'SS Class:

strong_major

3'SS Sequence:

AATATTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CCTGTTGTAATA

Flanking Amino Acid:

RRESLINELKDLMKIKRKET

Intron Amino Acid Position:

663

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.2

39.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.2

0.57

0.9

66.7

44.1

Minor 5ss

-0.3

3.1

66.9

44.7

Minor BPS

45.3

-0.3

Associated Gene:

Gene:

SMC1B

Ensembl Gene ID:

ENSAPLG00000008824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044324

70885873 - 70920473

34601

ENSAPLT00000009237

70885873 - 70920473

34601