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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70903525_70907234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70903525 - 70907234

Intron Length:

3710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTATTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTATTCAAAG

Flanking Amino Acid:

IKEFQKKINEAEDAVFKEFC

Intron Amino Acid Position:

748

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

70.9

0.47

1.1

71.6

37.3

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

49.4

-0.1

1.9

60.65

40.8

Associated Gene:

Gene:

SMC1B

Ensembl Gene ID:

ENSAPLG00000008824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044324

70885873 - 70920473

34601

ENSAPLT00000022161

70885873 - 70920473

34601

ENSAPLT00000009237

70885873 - 70920473

34601