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Intron Name: Anas_platyrhynchos_platyrhynchos_1_70917019_70920018_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70917019 - 70920018

Intron Length:

3000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTGGCCAGAACT

Flanking Amino Acid:

AALDNTNIDKVSSFIREQAH

Intron Amino Acid Position:

1141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

0.61

78.2

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

56.1

0.27

1.9

77.97

Associated Gene:

Gene:

SMC1B

Ensembl Gene ID:

ENSAPLG00000008824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022161

70885873 - 70920473

34601

ENSAPLT00000009237

70885873 - 70920473

34601

ENSAPLT00000044324

70885873 - 70920473

34601