Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_70933837_70935672_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

70933837 - 70935672

Intron Length:

1836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTACTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTTTCTTTTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

80.1

0.68

0.8

81.2

29.7

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

80.4

1.04

1.5

96.11

29.5

Associated Gene:

Gene:

FAM118A

Ensembl Gene ID:

ENSAPLG00000008680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009021

70925090 - 70935830

10741